WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05B2.5a.2 Sequence Name  K05B2.5a.2
Length (nt)  2717   Chromosome Location  X: 4921344-4926932
Chromosome . Primary Identifier  X Chromosome Location . Start  4921344
Chromosome Location . End  4926932 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05B2.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003986 mct-4 K05B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05B2.5a K05B2.5a 2034   X: 4921938-4921967

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.5a.2 4921344 4926932 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232032   624   X: 4921344-4921967 Caenorhabditis elegans
Exon232035   71   X: 4922018-4922088 Caenorhabditis elegans
Exon232040   126   X: 4922930-4923055 Caenorhabditis elegans
Exon232043   126   X: 4923105-4923230 Caenorhabditis elegans
Exon232047   162   X: 4923314-4923475 Caenorhabditis elegans
Exon232051   227   X: 4923528-4923754 Caenorhabditis elegans
Exon232055   254   X: 4924199-4924452 Caenorhabditis elegans
Exon232059   293   X: 4924502-4924794 Caenorhabditis elegans
Exon232063   231   X: 4925325-4925555 Caenorhabditis elegans
Exon232067   355   X: 4925604-4925958 Caenorhabditis elegans
Exon232071   143   X: 4926004-4926146 Caenorhabditis elegans
Exon232075   105   X: 4926828-4926932 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.5a.2 4921344 4926932 -1

1 Sequence

Length
2717

1 Sequence Ontology Term

Identifier Name Description
transcript