WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05B2.5a.1 Sequence Name  K05B2.5a.1
Length (nt)  2799   Chromosome Location  X: 4921344-4929757
Chromosome . Primary Identifier  X Chromosome Location . Start  4921344
Chromosome Location . End  4929757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05B2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003986 mct-4 K05B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05B2.5a K05B2.5a 2034   X: 4921938-4921967

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.5a.1 4921344 4929757 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232033   624   X: 4921344-4921967 Caenorhabditis elegans
Exon232034   71   X: 4922018-4922088 Caenorhabditis elegans
Exon232039   126   X: 4922930-4923055 Caenorhabditis elegans
Exon232042   126   X: 4923105-4923230 Caenorhabditis elegans
Exon232046   162   X: 4923314-4923475 Caenorhabditis elegans
Exon232050   227   X: 4923528-4923754 Caenorhabditis elegans
Exon232054   254   X: 4924199-4924452 Caenorhabditis elegans
Exon232058   293   X: 4924502-4924794 Caenorhabditis elegans
Exon232062   231   X: 4925325-4925555 Caenorhabditis elegans
Exon232066   355   X: 4925604-4925958 Caenorhabditis elegans
Exon232070   143   X: 4926004-4926146 Caenorhabditis elegans
Exon232074   105   X: 4926828-4926932 Caenorhabditis elegans
Exon232080   82   X: 4929676-4929757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.5a.1 4921344 4929757 -1

1 Sequence

Length
2799

1 Sequence Ontology Term

Identifier Name Description
transcript