WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03F4.3a.1 Sequence Name  M03F4.3a.1
Length (nt)  1977   Chromosome Location  X: 4948049-4955345
Chromosome . Primary Identifier  X Chromosome Location . Start  4948049
Chromosome Location . End  4955345 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03F4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006475 tyra-3 M03F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03F4.3a M03F4.3a 1695   X: 4948119-4948121

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03F4.3a.1 4948049 4955345 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232082   73   X: 4948049-4948121 Caenorhabditis elegans
Exon232086   231   X: 4951827-4952057 Caenorhabditis elegans
Exon232088   187   X: 4952108-4952294 Caenorhabditis elegans
Exon232091   130   X: 4953074-4953203 Caenorhabditis elegans
Exon232094   345   X: 4953576-4953920 Caenorhabditis elegans
Exon232097   93   X: 4954010-4954102 Caenorhabditis elegans
Exon232100   106   X: 4954151-4954256 Caenorhabditis elegans
Exon232103   213   X: 4954370-4954582 Caenorhabditis elegans
Exon232106   115   X: 4954640-4954754 Caenorhabditis elegans
Exon232109   131   X: 4954810-4954940 Caenorhabditis elegans
Exon232113   353   X: 4954993-4955345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03F4.3a.1 4948049 4955345 1

1 Sequence

Length
1977

1 Sequence Ontology Term

Identifier Name Description
transcript