WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03F4.7a.1 Sequence Name  M03F4.7a.1
Length (nt)  1220   Chromosome Location  X: 4969534-4970911
Chromosome . Primary Identifier  X Chromosome Location . Start  4969534
Chromosome Location . End  4970911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03F4.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019760 calu-1 M03F4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03F4.7a M03F4.7a 945   X: 4969793-4969993

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03F4.7a.1 4969534 4970911 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232135   460   X: 4969534-4969993 Caenorhabditis elegans
Exon232136   547   X: 4970045-4970591 Caenorhabditis elegans
Exon232138   104   X: 4970644-4970747 Caenorhabditis elegans
Exon232139   109   X: 4970803-4970911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03F4.7a.1 4969534 4970911 -1

1 Sequence

Length
1220

1 Sequence Ontology Term

Identifier Name Description
transcript