WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC8.6.1 Sequence Name  ZC8.6.1
Length (nt)  2202   Chromosome Location  X: 4972515-4997598
Chromosome . Primary Identifier  X Chromosome Location . Start  4972515
Chromosome Location . End  4997598 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022501 ZC8.6 ZC8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC8.6 ZC8.6 1782   X: 4972916-4973118

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.6.1 4972515 4997598 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232143   604   X: 4972515-4973118 Caenorhabditis elegans
Exon232144   94   X: 4973234-4973327 Caenorhabditis elegans
Exon232145   117   X: 4973377-4973493 Caenorhabditis elegans
Exon232146   134   X: 4974215-4974348 Caenorhabditis elegans
Exon232147   138   X: 4975623-4975760 Caenorhabditis elegans
Exon232149   55   X: 4976975-4977029 Caenorhabditis elegans
Exon232150   110   X: 4977843-4977952 Caenorhabditis elegans
Exon232151   163   X: 4978001-4978163 Caenorhabditis elegans
Exon232153   204   X: 4979391-4979594 Caenorhabditis elegans
Exon232320   129   X: 4993304-4993432 Caenorhabditis elegans
Exon232321   143   X: 4993894-4994036 Caenorhabditis elegans
Exon232322   98   X: 4994080-4994177 Caenorhabditis elegans
Exon232323   169   X: 4994972-4995140 Caenorhabditis elegans
Exon232324   44   X: 4997555-4997598 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.6.1 4972515 4997598 -1

1 Sequence

Length
2202

1 Sequence Ontology Term

Identifier Name Description
transcript