WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:ZC8.4a.1 Sequence Name  ZC8.4a.1
Length (nt)  7904   Chromosome Location  X: 4980512-4993242
Chromosome . Primary Identifier  X Chromosome Location . Start  4980512
Chromosome Location . End  4993242 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022500 lfi-1 ZC8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC8.4a ZC8.4a 7191   X: 4983584-4983896

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.4a.1 4980512 4993242 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232155   49   X: 4980512-4980560 Caenorhabditis elegans
Exon232157   256   X: 4981240-4981495 Caenorhabditis elegans
Exon232161   334   X: 4983563-4983896 Caenorhabditis elegans
Exon232167   139   X: 4984067-4984205 Caenorhabditis elegans
Exon232180   112   X: 4984790-4984901 Caenorhabditis elegans
Exon232185   90   X: 4984950-4985039 Caenorhabditis elegans
Exon232194   128   X: 4985082-4985209 Caenorhabditis elegans
Exon232203   364   X: 4985261-4985624 Caenorhabditis elegans
Exon232212   1391   X: 4985677-4987067 Caenorhabditis elegans
Exon232221   1532   X: 4987126-4988657 Caenorhabditis elegans
Exon232230   431   X: 4988714-4989144 Caenorhabditis elegans
Exon232239   184   X: 4989190-4989373 Caenorhabditis elegans
Exon232248   444   X: 4989429-4989872 Caenorhabditis elegans
Exon232257   252   X: 4989919-4990170 Caenorhabditis elegans
Exon232266   164   X: 4990219-4990382 Caenorhabditis elegans
Exon232275   780   X: 4990428-4991207 Caenorhabditis elegans
Exon232284   246   X: 4991255-4991500 Caenorhabditis elegans
Exon232293   239   X: 4991551-4991789 Caenorhabditis elegans
Exon232302   152   X: 4991888-4992039 Caenorhabditis elegans
Exon232316   617   X: 4992626-4993242 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.4a.1 4980512 4993242 1

1 Sequence

Length
7904

1 Sequence Ontology Term

Identifier Name Description
transcript