WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:ZC8.4a.2 Sequence Name  ZC8.4a.2
Length (nt)  7959   Chromosome Location  X: 4981136-4993242
Chromosome . Primary Identifier  X Chromosome Location . Start  4981136
Chromosome Location . End  4993242 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC8.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022500 lfi-1 ZC8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC8.4a ZC8.4a 7191   X: 4983584-4983896

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.4a.2 4981136 4993242 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232156   360   X: 4981136-4981495 Caenorhabditis elegans
Exon232162   334   X: 4983563-4983896 Caenorhabditis elegans
Exon232168   139   X: 4984067-4984205 Caenorhabditis elegans
Exon232181   112   X: 4984790-4984901 Caenorhabditis elegans
Exon232186   90   X: 4984950-4985039 Caenorhabditis elegans
Exon232195   128   X: 4985082-4985209 Caenorhabditis elegans
Exon232204   364   X: 4985261-4985624 Caenorhabditis elegans
Exon232213   1391   X: 4985677-4987067 Caenorhabditis elegans
Exon232222   1532   X: 4987126-4988657 Caenorhabditis elegans
Exon232231   431   X: 4988714-4989144 Caenorhabditis elegans
Exon232240   184   X: 4989190-4989373 Caenorhabditis elegans
Exon232249   444   X: 4989429-4989872 Caenorhabditis elegans
Exon232258   252   X: 4989919-4990170 Caenorhabditis elegans
Exon232267   164   X: 4990219-4990382 Caenorhabditis elegans
Exon232276   780   X: 4990428-4991207 Caenorhabditis elegans
Exon232285   246   X: 4991255-4991500 Caenorhabditis elegans
Exon232294   239   X: 4991551-4991789 Caenorhabditis elegans
Exon232303   152   X: 4991888-4992039 Caenorhabditis elegans
Exon232317   617   X: 4992626-4993242 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.4a.2 4981136 4993242 1

1 Sequence

Length
7959

1 Sequence Ontology Term

Identifier Name Description
transcript