WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC8.4h.1 Sequence Name  ZC8.4h.1
Length (nt)  7261   Chromosome Location  X: 4984065-4993236
Chromosome . Primary Identifier  X Chromosome Location . Start  4984065
Chromosome Location . End  4993236 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC8.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022500 lfi-1 ZC8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC8.4h ZC8.4h 6867   X: 4984078-4984205

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC8.4h.1 4984065 4993236 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232166   141   X: 4984065-4984205 Caenorhabditis elegans
Exon232184   112   X: 4984790-4984901 Caenorhabditis elegans
Exon232193   90   X: 4984950-4985039 Caenorhabditis elegans
Exon232202   128   X: 4985082-4985209 Caenorhabditis elegans
Exon232211   364   X: 4985261-4985624 Caenorhabditis elegans
Exon232220   1391   X: 4985677-4987067 Caenorhabditis elegans
Exon232229   1532   X: 4987126-4988657 Caenorhabditis elegans
Exon232238   431   X: 4988714-4989144 Caenorhabditis elegans
Exon232247   184   X: 4989190-4989373 Caenorhabditis elegans
Exon232256   444   X: 4989429-4989872 Caenorhabditis elegans
Exon232265   252   X: 4989919-4990170 Caenorhabditis elegans
Exon232274   164   X: 4990219-4990382 Caenorhabditis elegans
Exon232283   780   X: 4990428-4991207 Caenorhabditis elegans
Exon232292   246   X: 4991255-4991500 Caenorhabditis elegans
Exon232301   239   X: 4991551-4991789 Caenorhabditis elegans
Exon232310   152   X: 4991888-4992039 Caenorhabditis elegans
Exon232315   611   X: 4992626-4993236 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC8.4h.1 4984065 4993236 1

1 Sequence

Length
7261

1 Sequence Ontology Term

Identifier Name Description
transcript