WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC8.3.1 Sequence Name  ZC8.3.1
Length (nt)  1814   Chromosome Location  X: 4999270-5003516
Chromosome . Primary Identifier  X Chromosome Location . Start  4999270
Chromosome Location . End  5003516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022499 set-30 ZC8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC8.3 ZC8.3 1683   X: 4999277-4999428

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.3.1 4999270 5003516 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232325   159   X: 4999270-4999428 Caenorhabditis elegans
Exon232326   73   X: 4999476-4999548 Caenorhabditis elegans
Exon232327   214   X: 4999956-5000169 Caenorhabditis elegans
Exon232328   188   X: 5000227-5000414 Caenorhabditis elegans
Exon232329   104   X: 5000462-5000565 Caenorhabditis elegans
Exon232330   124   X: 5000616-5000739 Caenorhabditis elegans
Exon232331   102   X: 5000788-5000889 Caenorhabditis elegans
Exon232332   72   X: 5002573-5002644 Caenorhabditis elegans
Exon232333   239   X: 5002691-5002929 Caenorhabditis elegans
Exon232334   539   X: 5002978-5003516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.3.1 4999270 5003516 1

1 Sequence

Length
1814

1 Sequence Ontology Term

Identifier Name Description
transcript