WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC8.1.1 Sequence Name  ZC8.1.1
Length (nt)  1211   Chromosome Location  X: 5005240-5007037
Chromosome . Primary Identifier  X Chromosome Location . Start  5005240
Chromosome Location . End  5007037 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022498 hsd-2 ZC8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC8.1 ZC8.1 1125   X: 5005284-5005445

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.1.1 5005240 5007037 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232335   206   X: 5005240-5005445 Caenorhabditis elegans
Exon232336   96   X: 5005488-5005583 Caenorhabditis elegans
Exon232337   174   X: 5005627-5005800 Caenorhabditis elegans
Exon232338   141   X: 5005845-5005985 Caenorhabditis elegans
Exon232339   147   X: 5006034-5006180 Caenorhabditis elegans
Exon232340   276   X: 5006547-5006822 Caenorhabditis elegans
Exon232341   171   X: 5006867-5007037 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC8.1.1 5005240 5007037 1

1 Sequence

Length
1211

1 Sequence Ontology Term

Identifier Name Description
transcript