WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC449.3b.1 Sequence Name  ZC449.3b.1
Length (nt)  1236   Chromosome Location  X: 5018018-5020657
Chromosome . Primary Identifier  X Chromosome Location . Start  5018018
Chromosome Location . End  5020657 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC449.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022613 sek-3 ZC449.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC449.3b ZC449.3b 1236   X: 5018018-5018040

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC449.3b.1 5018018 5020657 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232356   23   X: 5018018-5018040 Caenorhabditis elegans
Exon232358   60   X: 5018395-5018454 Caenorhabditis elegans
Exon232360   64   X: 5018597-5018660 Caenorhabditis elegans
Exon232364   104   X: 5018716-5018819 Caenorhabditis elegans
Exon232367   169   X: 5018875-5019043 Caenorhabditis elegans
Exon232370   138   X: 5019090-5019227 Caenorhabditis elegans
Exon232373   120   X: 5019277-5019396 Caenorhabditis elegans
Exon232376   52   X: 5019511-5019562 Caenorhabditis elegans
Exon232379   128   X: 5019619-5019746 Caenorhabditis elegans
Exon232382   221   X: 5020227-5020447 Caenorhabditis elegans
Exon232383   157   X: 5020501-5020657 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC449.3b.1 5018018 5020657 1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
transcript