WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24H10.5.1 Sequence Name  C24H10.5.1
Length (nt)  985   Chromosome Location  X: 5074399-5077961
Chromosome . Primary Identifier  X Chromosome Location . Start  5074399
Chromosome Location . End  5077961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24H10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006861 cal-5 C24H10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24H10.5 C24H10.5 471   X: 5074810-5074841

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24H10.5.1 5074399 5077961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232475   443   X: 5074399-5074841 Caenorhabditis elegans
Exon232476   113   X: 5074891-5075003 Caenorhabditis elegans
Exon232477   94   X: 5075659-5075752 Caenorhabditis elegans
Exon232478   112   X: 5076460-5076571 Caenorhabditis elegans
Exon232479   84   X: 5076627-5076710 Caenorhabditis elegans
Exon232481   139   X: 5077823-5077961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24H10.5.1 5074399 5077961 -1

1 Sequence

Length
985

1 Sequence Ontology Term

Identifier Name Description
transcript