WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C42D8.4a.4 Sequence Name  C42D8.4a.4
Length (nt)  708   Chromosome Location  X: 5076635-5081623
Chromosome . Primary Identifier  X Chromosome Location . Start  5076635
Chromosome Location . End  5081623 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.4a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016600 ets-5 C42D8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D8.4a C42D8.4a 627   X: 5079779-5079844

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C42D8.4a.4 5076635 5081623 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232480   76   X: 5076635-5076710 Caenorhabditis elegans
Exon232485   71   X: 5079774-5079844 Caenorhabditis elegans
Exon232490   110   X: 5079892-5080001 Caenorhabditis elegans
Exon232495   139   X: 5080054-5080192 Caenorhabditis elegans
Exon232500   73   X: 5081263-5081335 Caenorhabditis elegans
Exon232502   239   X: 5081385-5081623 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C42D8.4a.4 5076635 5081623 -1

1 Sequence

Length
708

1 Sequence Ontology Term

Identifier Name Description
transcript