WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42D8.4b.1 Sequence Name  C42D8.4b.1
Length (nt)  741   Chromosome Location  X: 5079779-5084489
Chromosome . Primary Identifier  X Chromosome Location . Start  5079779
Chromosome Location . End  5084489 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016600 ets-5 C42D8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D8.4b C42D8.4b 741   X: 5079779-5079844

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C42D8.4b.1 5079779 5084489 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232486   66   X: 5079779-5079844 Caenorhabditis elegans
Exon232491   110   X: 5079892-5080001 Caenorhabditis elegans
Exon232496   139   X: 5080054-5080192 Caenorhabditis elegans
Exon232501   73   X: 5081263-5081335 Caenorhabditis elegans
Exon232506   244   X: 5081385-5081628 Caenorhabditis elegans
Exon232509   90   X: 5083062-5083151 Caenorhabditis elegans
Exon232513   19   X: 5084471-5084489 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C42D8.4b.1 5079779 5084489 -1

1 Sequence

Length
741

1 Sequence Ontology Term

Identifier Name Description
transcript