WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31H2.1b.1 Sequence Name  C31H2.1b.1
Length (nt)  2401   Chromosome Location  X: 5138991-5146741
Chromosome . Primary Identifier  X Chromosome Location . Start  5138991
Chromosome Location . End  5146741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016292 tbc-7 C31H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31H2.1b C31H2.1b 1920   X: 5139017-5139151

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31H2.1b.1 5138991 5146741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232596   161   X: 5138991-5139151 Caenorhabditis elegans
Exon232598   98   X: 5139200-5139297 Caenorhabditis elegans
Exon232600   97   X: 5139351-5139447 Caenorhabditis elegans
Exon232605   114   X: 5140926-5141039 Caenorhabditis elegans
Exon232609   148   X: 5142236-5142383 Caenorhabditis elegans
Exon232613   140   X: 5142824-5142963 Caenorhabditis elegans
Exon232617   90   X: 5143422-5143511 Caenorhabditis elegans
Exon232621   141   X: 5143559-5143699 Caenorhabditis elegans
Exon232625   144   X: 5143797-5143940 Caenorhabditis elegans
Exon232629   90   X: 5143987-5144076 Caenorhabditis elegans
Exon232633   93   X: 5144678-5144770 Caenorhabditis elegans
Exon232637   94   X: 5144830-5144923 Caenorhabditis elegans
Exon232641   112   X: 5144973-5145084 Caenorhabditis elegans
Exon232645   120   X: 5145135-5145254 Caenorhabditis elegans
Exon232649   148   X: 5145299-5145446 Caenorhabditis elegans
Exon232652   611   X: 5146131-5146741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31H2.1b.1 5138991 5146741 1

1 Sequence

Length
2401

1 Sequence Ontology Term

Identifier Name Description
transcript