WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03G11.2.1 Sequence Name  T03G11.2.1
Length (nt)  996   Chromosome Location  X: 5180174-5181495
Chromosome . Primary Identifier  X Chromosome Location . Start  5180174
Chromosome Location . End  5181495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03G11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005711 sru-48 T03G11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03G11.2 T03G11.2 996   X: 5180174-5180404

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03G11.2.1 5180174 5181495 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232724   231   X: 5180174-5180404 Caenorhabditis elegans
Exon232725   210   X: 5180450-5180659 Caenorhabditis elegans
Exon232726   269   X: 5180835-5181103 Caenorhabditis elegans
Exon232727   97   X: 5181162-5181258 Caenorhabditis elegans
Exon232728   189   X: 5181307-5181495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03G11.2.1 5180174 5181495 1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
transcript