WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34B4A.7.2 Sequence Name  Y34B4A.7.2
Length (nt)  1370   Chromosome Location  X: 5244362-5246922
Chromosome . Primary Identifier  X Chromosome Location . Start  5244362
Chromosome Location . End  5246922 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021323 Y34B4A.7 Y34B4A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34B4A.7 Y34B4A.7 1110   X: 5244389-5244438

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y34B4A.7.2 5244362 5246922 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232887   77   X: 5244362-5244438 Caenorhabditis elegans
Exon232889   85   X: 5244488-5244572 Caenorhabditis elegans
Exon232891   80   X: 5244625-5244704 Caenorhabditis elegans
Exon232893   176   X: 5244753-5244928 Caenorhabditis elegans
Exon232895   68   X: 5245217-5245284 Caenorhabditis elegans
Exon232897   138   X: 5245836-5245973 Caenorhabditis elegans
Exon232899   136   X: 5246027-5246162 Caenorhabditis elegans
Exon232901   123   X: 5246221-5246343 Caenorhabditis elegans
Exon232903   56   X: 5246393-5246448 Caenorhabditis elegans
Exon232905   431   X: 5246492-5246922 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y34B4A.7.2 5244362 5246922 1

1 Sequence

Length
1370

1 Sequence Ontology Term

Identifier Name Description
transcript