WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y34B4A.5 Sequence Name  Y34B4A.5
Length (nt)  660   Chromosome Location  X: 5257309-5257342
Chromosome . Primary Identifier  X Chromosome Location . Start  5257309
Chromosome Location . End  5257342
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42186 NSPG-12 24.1 219 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00055820

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y34B4A.5 5257309 5257342 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021321 nspg-12 Y34B4A.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y34B4A.5 5257309 5257342 1
CDS:Y34B4A.5 5257393 5257509 1
CDS:Y34B4A.5 5257557 5257644 1
CDS:Y34B4A.5 5257700 5257789 1
CDS:Y34B4A.5 5257838 5257902 1
CDS:Y34B4A.5 5257951 5258068 1
CDS:Y34B4A.5 5258124 5258263 1
CDS:Y34B4A.5 5258306 5258313 1

1 Sequence

Length
660

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y34B4A.5.1 Y34B4A.5.1 741   X: 5257299-5258384