WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34B4A.8b.3 Sequence Name  Y34B4A.8b.3
Length (nt)  2427   Chromosome Location  X: 5271781-5276567
Chromosome . Primary Identifier  X Chromosome Location . Start  5271781
Chromosome Location . End  5276567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.8b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021324 rga-8 Y34B4A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34B4A.8b Y34B4A.8b 1968   X: 5272183-5272339

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y34B4A.8b.3 5271781 5276567 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232982   559   X: 5271781-5272339 Caenorhabditis elegans
Exon232994   275   X: 5272398-5272672 Caenorhabditis elegans
Exon233004   241   X: 5272947-5273187 Caenorhabditis elegans
Exon233014   147   X: 5273238-5273384 Caenorhabditis elegans
Exon233024   129   X: 5273441-5273569 Caenorhabditis elegans
Exon233034   125   X: 5273619-5273743 Caenorhabditis elegans
Exon233044   203   X: 5273796-5273998 Caenorhabditis elegans
Exon233054   94   X: 5274259-5274352 Caenorhabditis elegans
Exon233064   155   X: 5274414-5274568 Caenorhabditis elegans
Exon233074   247   X: 5274616-5274862 Caenorhabditis elegans
Exon233084   87   X: 5274910-5274996 Caenorhabditis elegans
Exon233094   61   X: 5275066-5275126 Caenorhabditis elegans
Exon233102   52   X: 5275236-5275287 Caenorhabditis elegans
Exon233116   52   X: 5276516-5276567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y34B4A.8b.3 5271781 5276567 -1

1 Sequence

Length
2427

1 Sequence Ontology Term

Identifier Name Description
transcript