WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34B4A.8a.2 Sequence Name  Y34B4A.8a.2
Length (nt)  2359   Chromosome Location  X: 5271785-5275289
Chromosome . Primary Identifier  X Chromosome Location . Start  5271785
Chromosome Location . End  5275289 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021324 rga-8 Y34B4A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34B4A.8a Y34B4A.8a 1815   X: 5272322-5272325

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y34B4A.8a.2 5271785 5275289 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232984   541   X: 5271785-5272325 Caenorhabditis elegans
Exon232991   275   X: 5272398-5272672 Caenorhabditis elegans
Exon233001   241   X: 5272947-5273187 Caenorhabditis elegans
Exon233011   147   X: 5273238-5273384 Caenorhabditis elegans
Exon233021   129   X: 5273441-5273569 Caenorhabditis elegans
Exon233031   125   X: 5273619-5273743 Caenorhabditis elegans
Exon233041   203   X: 5273796-5273998 Caenorhabditis elegans
Exon233051   94   X: 5274259-5274352 Caenorhabditis elegans
Exon233061   155   X: 5274414-5274568 Caenorhabditis elegans
Exon233071   247   X: 5274616-5274862 Caenorhabditis elegans
Exon233081   87   X: 5274910-5274996 Caenorhabditis elegans
Exon233091   61   X: 5275066-5275126 Caenorhabditis elegans
Exon233107   54   X: 5275236-5275289 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y34B4A.8a.2 5271785 5275289 -1

1 Sequence

Length
2359

1 Sequence Ontology Term

Identifier Name Description
transcript