WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.3c.1 Sequence Name  F32A6.3c.1
Length (nt)  2706   Chromosome Location  X: 5283836-5289540
Chromosome . Primary Identifier  X Chromosome Location . Start  5283836
Chromosome Location . End  5289540 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017974 vps-41 F32A6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.3c F32A6.3c 2706   X: 5283836-5284117

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.3c.1 5283836 5289540 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233140   282   X: 5283836-5284117 Caenorhabditis elegans
Exon233143   126   X: 5285946-5286071 Caenorhabditis elegans
Exon233145   138   X: 5286119-5286256 Caenorhabditis elegans
Exon233149   104   X: 5286314-5286417 Caenorhabditis elegans
Exon233152   304   X: 5286465-5286768 Caenorhabditis elegans
Exon233155   128   X: 5286824-5286951 Caenorhabditis elegans
Exon233158   187   X: 5287005-5287191 Caenorhabditis elegans
Exon233161   192   X: 5287243-5287434 Caenorhabditis elegans
Exon233164   648   X: 5287953-5288600 Caenorhabditis elegans
Exon233167   100   X: 5288648-5288747 Caenorhabditis elegans
Exon233169   210   X: 5288797-5289006 Caenorhabditis elegans
Exon233172   212   X: 5289203-5289414 Caenorhabditis elegans
Exon233173   75   X: 5289466-5289540 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.3c.1 5283836 5289540 1

1 Sequence

Length
2706

1 Sequence Ontology Term

Identifier Name Description
transcript