WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F32A6.3a Sequence Name  F32A6.3a
Length (nt)  2280   Chromosome Location  X: 5286137-5286256
Chromosome . Primary Identifier  X Chromosome Location . Start  5286137
Chromosome Location . End  5286256
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37009 VPS-41, isoform a 86.7 759 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00094668
WBRNAi00046083
WBRNAi00014198
WBRNAi00076367
WBRNAi00090916
WBRNAi00061394
WBRNAi00087626
WBRNAi00077467
WBRNAi00007976
WBRNAi00111952
WBRNAi00087611
WBRNAi00087642
WBRNAi00080479
WBRNAi00087616
WBRNAi00078008
WBRNAi00114426
WBRNAi00113654
WBRNAi00113653
WBRNAi00114432
WBRNAi00117182
WBRNAi00117181
WBRNAi00099138

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F32A6.3a 5286137 5286256 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017974 vps-41 F32A6.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F32A6.3a 5286137 5286256 1
CDS:F32A6.3a 5286314 5286417 1
CDS:F32A6.3a 5286465 5286768 1
CDS:F32A6.3a 5286824 5286951 1
CDS:F32A6.3a 5287005 5287191 1
CDS:F32A6.3a 5287243 5287434 1
CDS:F32A6.3a 5287953 5288600 1
CDS:F32A6.3a 5288648 5288747 1
CDS:F32A6.3a 5288797 5289006 1
CDS:F32A6.3a 5289203 5289414 1
CDS:F32A6.3a 5289466 5289540 1

1 Sequence

Length
2280

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F32A6.3a.1 F32A6.3a.1 2895   X: 5283831-5289724