WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.3b.1 Sequence Name  F32A6.3b.1
Length (nt)  2613   Chromosome Location  X: 5286137-5289677
Chromosome . Primary Identifier  X Chromosome Location . Start  5286137
Chromosome Location . End  5289677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017974 vps-41 F32A6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.3b F32A6.3b 2046   X: 5286137-5286256

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.3b.1 5286137 5289677 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233146   120   X: 5286137-5286256 Caenorhabditis elegans
Exon233148   104   X: 5286314-5286417 Caenorhabditis elegans
Exon233151   304   X: 5286465-5286768 Caenorhabditis elegans
Exon233154   128   X: 5286824-5286951 Caenorhabditis elegans
Exon233157   187   X: 5287005-5287191 Caenorhabditis elegans
Exon233160   192   X: 5287243-5287434 Caenorhabditis elegans
Exon233163   648   X: 5287953-5288600 Caenorhabditis elegans
Exon233166   100   X: 5288648-5288747 Caenorhabditis elegans
Exon233170   618   X: 5288797-5289414 Caenorhabditis elegans
Exon233174   212   X: 5289466-5289677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.3b.1 5286137 5289677 1

1 Sequence

Length
2613

1 Sequence Ontology Term

Identifier Name Description
transcript