WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.5c.1 Sequence Name  F32A6.5c.1
Length (nt)  3136   Chromosome Location  X: 5307486-5316950
Chromosome . Primary Identifier  X Chromosome Location . Start  5307486
Chromosome Location . End  5316950 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006064 sto-2 F32A6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.5c F32A6.5c 1128   X: 5307832-5307898

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.5c.1 5307486 5316950 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233316   413   X: 5307486-5307898 Caenorhabditis elegans
Exon233322   119   X: 5307967-5308085 Caenorhabditis elegans
Exon233326   79   X: 5308134-5308212 Caenorhabditis elegans
Exon233330   56   X: 5308649-5308704 Caenorhabditis elegans
Exon233334   94   X: 5308750-5308843 Caenorhabditis elegans
Exon233338   193   X: 5308888-5309080 Caenorhabditis elegans
Exon233342   180   X: 5309126-5309305 Caenorhabditis elegans
Exon233346   101   X: 5309422-5309522 Caenorhabditis elegans
Exon233350   121   X: 5311643-5311763 Caenorhabditis elegans
Exon233355   1780   X: 5315171-5316950 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.5c.1 5307486 5316950 -1

1 Sequence

Length
3136

1 Sequence Ontology Term

Identifier Name Description
transcript