WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.5d.1 Sequence Name  F32A6.5d.1
Length (nt)  1409   Chromosome Location  X: 5307495-5312827
Chromosome . Primary Identifier  X Chromosome Location . Start  5307495
Chromosome Location . End  5312827 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006064 sto-2 F32A6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.5d F32A6.5d 1044   X: 5307832-5307898

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.5d.1 5307495 5312827 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233319   404   X: 5307495-5307898 Caenorhabditis elegans
Exon233323   119   X: 5307967-5308085 Caenorhabditis elegans
Exon233327   79   X: 5308134-5308212 Caenorhabditis elegans
Exon233331   56   X: 5308649-5308704 Caenorhabditis elegans
Exon233335   94   X: 5308750-5308843 Caenorhabditis elegans
Exon233339   193   X: 5308888-5309080 Caenorhabditis elegans
Exon233343   180   X: 5309126-5309305 Caenorhabditis elegans
Exon233347   101   X: 5309422-5309522 Caenorhabditis elegans
Exon233351   121   X: 5311643-5311763 Caenorhabditis elegans
Exon233353   62   X: 5312766-5312827 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.5d.1 5307495 5312827 -1

1 Sequence

Length
1409

1 Sequence Ontology Term

Identifier Name Description
transcript