WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26B9.6.1 Sequence Name  C26B9.6.1
Length (nt)  1680   Chromosome Location  X: 5332355-5335468
Chromosome . Primary Identifier  X Chromosome Location . Start  5332355
Chromosome Location . End  5335468 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26B9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016135 C26B9.6 C26B9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26B9.6 C26B9.6 921   X: 5333077-5333161

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26B9.6.1 5332355 5335468 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233374   807   X: 5332355-5333161 Caenorhabditis elegans
Exon233375   95   X: 5333209-5333303 Caenorhabditis elegans
Exon233376   87   X: 5333948-5334034 Caenorhabditis elegans
Exon233377   74   X: 5334085-5334158 Caenorhabditis elegans
Exon233378   180   X: 5334204-5334383 Caenorhabditis elegans
Exon233379   117   X: 5334455-5334571 Caenorhabditis elegans
Exon233380   62   X: 5334625-5334686 Caenorhabditis elegans
Exon233381   167   X: 5335168-5335334 Caenorhabditis elegans
Exon233382   91   X: 5335378-5335468 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26B9.6.1 5332355 5335468 -1

1 Sequence

Length
1680

1 Sequence Ontology Term

Identifier Name Description
transcript