WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C8.6.1 Sequence Name  F35C8.6.1
Length (nt)  774   Chromosome Location  X: 5353103-5354072
Chromosome . Primary Identifier  X Chromosome Location . Start  5353103
Chromosome Location . End  5354072 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003990 pfn-2 F35C8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C8.6 F35C8.6 396   X: 5353527-5353627

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.6.1 5353103 5354072 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233435   351   X: 5353103-5353453 Caenorhabditis elegans
Exon233436   110   X: 5353518-5353627 Caenorhabditis elegans
Exon233437   172   X: 5353674-5353845 Caenorhabditis elegans
Exon233438   141   X: 5353932-5354072 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.6.1 5353103 5354072 -1

1 Sequence

Length
774

1 Sequence Ontology Term

Identifier Name Description
transcript