WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F35C8.7c.1 Sequence Name  F35C8.7c.1
Length (nt)  2590   Chromosome Location  X: 5355644-5359949
Chromosome . Primary Identifier  X Chromosome Location . Start  5355644
Chromosome Location . End  5359949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C8.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018037 chtl-1 F35C8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C8.7c F35C8.7c 2322   X: 5355897-5356006

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.7c.1 5355644 5359949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233439   363   X: 5355644-5356006 Caenorhabditis elegans
Exon233444   72   X: 5356077-5356148 Caenorhabditis elegans
Exon233447   102   X: 5356205-5356306 Caenorhabditis elegans
Exon233450   145   X: 5357003-5357147 Caenorhabditis elegans
Exon233453   604   X: 5357202-5357805 Caenorhabditis elegans
Exon233456   417   X: 5358143-5358559 Caenorhabditis elegans
Exon233459   160   X: 5358609-5358768 Caenorhabditis elegans
Exon233462   284   X: 5358811-5359094 Caenorhabditis elegans
Exon233465   168   X: 5359367-5359534 Caenorhabditis elegans
Exon233467   275   X: 5359675-5359949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.7c.1 5355644 5359949 -1

1 Sequence

Length
2590

1 Sequence Ontology Term

Identifier Name Description
transcript