WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C8.7a.1 Sequence Name  F35C8.7a.1
Length (nt)  2578   Chromosome Location  X: 5355648-5359947
Chromosome . Primary Identifier  X Chromosome Location . Start  5355648
Chromosome Location . End  5359947 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C8.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018037 chtl-1 F35C8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C8.7a F35C8.7a 2316   X: 5355897-5356006

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.7a.1 5355648 5359947 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233440   359   X: 5355648-5356006 Caenorhabditis elegans
Exon233442   72   X: 5356077-5356148 Caenorhabditis elegans
Exon233445   102   X: 5356205-5356306 Caenorhabditis elegans
Exon233448   145   X: 5357003-5357147 Caenorhabditis elegans
Exon233451   604   X: 5357202-5357805 Caenorhabditis elegans
Exon233454   417   X: 5358143-5358559 Caenorhabditis elegans
Exon233457   154   X: 5358609-5358762 Caenorhabditis elegans
Exon233460   284   X: 5358811-5359094 Caenorhabditis elegans
Exon233463   168   X: 5359367-5359534 Caenorhabditis elegans
Exon233466   273   X: 5359675-5359947 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.7a.1 5355648 5359947 -1

1 Sequence

Length
2578

1 Sequence Ontology Term

Identifier Name Description
transcript