WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C8.7b.1 Sequence Name  F35C8.7b.1
Length (nt)  2231   Chromosome Location  X: 5355897-5364322
Chromosome . Primary Identifier  X Chromosome Location . Start  5355897
Chromosome Location . End  5364322 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C8.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018037 chtl-1 F35C8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C8.7b F35C8.7b 2193   X: 5355897-5356006

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.7b.1 5355897 5364322 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233441   110   X: 5355897-5356006 Caenorhabditis elegans
Exon233443   72   X: 5356077-5356148 Caenorhabditis elegans
Exon233446   102   X: 5356205-5356306 Caenorhabditis elegans
Exon233449   145   X: 5357003-5357147 Caenorhabditis elegans
Exon233452   604   X: 5357202-5357805 Caenorhabditis elegans
Exon233455   417   X: 5358143-5358559 Caenorhabditis elegans
Exon233458   154   X: 5358609-5358762 Caenorhabditis elegans
Exon233461   284   X: 5358811-5359094 Caenorhabditis elegans
Exon233464   168   X: 5359367-5359534 Caenorhabditis elegans
Exon233469   58   X: 5363447-5363504 Caenorhabditis elegans
Exon233470   51   X: 5363742-5363792 Caenorhabditis elegans
Exon233471   66   X: 5364257-5364322 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.7b.1 5355897 5364322 -1

1 Sequence

Length
2231

1 Sequence Ontology Term

Identifier Name Description
transcript