WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C8.8a.1 Sequence Name  F35C8.8a.1
Length (nt)  270   Chromosome Location  X: 5369316-5372625
Chromosome . Primary Identifier  X Chromosome Location . Start  5369316
Chromosome Location . End  5372625 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C8.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018038 F35C8.8 F35C8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C8.8a F35C8.8a 270   X: 5369316-5369335

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.8a.1 5369316 5372625 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233480   20   X: 5369316-5369335 Caenorhabditis elegans
Exon233504   114   X: 5372169-5372282 Caenorhabditis elegans
Exon233506   99   X: 5372328-5372426 Caenorhabditis elegans
Exon233509   37   X: 5372589-5372625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35C8.8a.1 5369316 5372625 -1

1 Sequence

Length
270

1 Sequence Ontology Term

Identifier Name Description
transcript