WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03F11.1.1 Sequence Name  C03F11.1.1
Length (nt)  2277   Chromosome Location  X: 5386858-5394528
Chromosome . Primary Identifier  X Chromosome Location . Start  5386858
Chromosome Location . End  5394528 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03F11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015387 kcnl-3 C03F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03F11.1 C03F11.1 2079   X: 5386858-5386996

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03F11.1.1 5386858 5394528 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233537   139   X: 5386858-5386996 Caenorhabditis elegans
Exon233538   77   X: 5387860-5387936 Caenorhabditis elegans
Exon233539   153   X: 5388401-5388553 Caenorhabditis elegans
Exon233540   139   X: 5389387-5389525 Caenorhabditis elegans
Exon233541   129   X: 5389823-5389951 Caenorhabditis elegans
Exon233543   79   X: 5390856-5390934 Caenorhabditis elegans
Exon233544   72   X: 5391327-5391398 Caenorhabditis elegans
Exon233545   199   X: 5391447-5391645 Caenorhabditis elegans
Exon233546   109   X: 5391692-5391800 Caenorhabditis elegans
Exon233547   182   X: 5392390-5392571 Caenorhabditis elegans
Exon233548   306   X: 5392619-5392924 Caenorhabditis elegans
Exon233549   236   X: 5393004-5393239 Caenorhabditis elegans
Exon233550   145   X: 5393969-5394113 Caenorhabditis elegans
Exon233551   64   X: 5394163-5394226 Caenorhabditis elegans
Exon233552   248   X: 5394281-5394528 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03F11.1.1 5386858 5394528 1

1 Sequence

Length
2277

1 Sequence Ontology Term

Identifier Name Description
transcript