WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03F11.2.1 Sequence Name  C03F11.2.1
Length (nt)  1416   Chromosome Location  X: 5394478-5397400
Chromosome . Primary Identifier  X Chromosome Location . Start  5394478
Chromosome Location . End  5397400 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03F11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015388 C03F11.2 C03F11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03F11.2 C03F11.2 1089   X: 5394563-5394587

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03F11.2.1 5394478 5397400 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233553   110   X: 5394478-5394587 Caenorhabditis elegans
Exon233554   142   X: 5394632-5394773 Caenorhabditis elegans
Exon233555   105   X: 5395237-5395341 Caenorhabditis elegans
Exon233556   168   X: 5395390-5395557 Caenorhabditis elegans
Exon233557   113   X: 5395617-5395729 Caenorhabditis elegans
Exon233558   148   X: 5395778-5395925 Caenorhabditis elegans
Exon233559   118   X: 5395976-5396093 Caenorhabditis elegans
Exon233560   273   X: 5396659-5396931 Caenorhabditis elegans
Exon233561   81   X: 5397015-5397095 Caenorhabditis elegans
Exon233562   158   X: 5397243-5397400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03F11.2.1 5394478 5397400 -1

1 Sequence

Length
1416

1 Sequence Ontology Term

Identifier Name Description
transcript