WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25F6.3.1 Sequence Name  C25F6.3.1
Length (nt)  3345   Chromosome Location  X: 5467870-5472683
Chromosome . Primary Identifier  X Chromosome Location . Start  5467870
Chromosome Location . End  5472683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25F6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016103 dpyd-1 C25F6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25F6.3 C25F6.3 3180   X: 5467872-5467946

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25F6.3.1 5467870 5472683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233760   77   X: 5467870-5467946 Caenorhabditis elegans
Exon233761   114   X: 5468164-5468277 Caenorhabditis elegans
Exon233762   89   X: 5468324-5468412 Caenorhabditis elegans
Exon233763   250   X: 5469054-5469303 Caenorhabditis elegans
Exon233764   469   X: 5469353-5469821 Caenorhabditis elegans
Exon233765   173   X: 5469871-5470043 Caenorhabditis elegans
Exon233766   128   X: 5470091-5470218 Caenorhabditis elegans
Exon233767   83   X: 5470282-5470364 Caenorhabditis elegans
Exon233768   152   X: 5470512-5470663 Caenorhabditis elegans
Exon233769   618   X: 5470712-5471329 Caenorhabditis elegans
Exon233770   732   X: 5471393-5472124 Caenorhabditis elegans
Exon233771   134   X: 5472171-5472304 Caenorhabditis elegans
Exon233772   326   X: 5472358-5472683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25F6.3.1 5467870 5472683 1

1 Sequence

Length
3345

1 Sequence Ontology Term

Identifier Name Description
transcript