WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23F2.2.1 Sequence Name  T23F2.2.1
Length (nt)  5054   Chromosome Location  X: 5495985-5505248
Chromosome . Primary Identifier  X Chromosome Location . Start  5495985
Chromosome Location . End  5505248 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23F2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020735 T23F2.2 T23F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F2.2 T23F2.2 4671   X: 5496308-5496385

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T23F2.2.1 5495985 5505248 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233829   401   X: 5495985-5496385 Caenorhabditis elegans
Exon233830   282   X: 5496845-5497126 Caenorhabditis elegans
Exon233831   177   X: 5497172-5497348 Caenorhabditis elegans
Exon233832   94   X: 5497719-5497812 Caenorhabditis elegans
Exon233833   65   X: 5497908-5497972 Caenorhabditis elegans
Exon233834   274   X: 5498029-5498302 Caenorhabditis elegans
Exon233835   144   X: 5498353-5498496 Caenorhabditis elegans
Exon233836   161   X: 5498556-5498716 Caenorhabditis elegans
Exon233837   99   X: 5498766-5498864 Caenorhabditis elegans
Exon233838   178   X: 5499202-5499379 Caenorhabditis elegans
Exon233839   323   X: 5499425-5499747 Caenorhabditis elegans
Exon233840   243   X: 5499808-5500050 Caenorhabditis elegans
Exon233841   108   X: 5500437-5500544 Caenorhabditis elegans
Exon233842   282   X: 5500592-5500873 Caenorhabditis elegans
Exon233843   255   X: 5500926-5501180 Caenorhabditis elegans
Exon233844   100   X: 5501234-5501333 Caenorhabditis elegans
Exon233845   140   X: 5501378-5501517 Caenorhabditis elegans
Exon233846   273   X: 5501662-5501934 Caenorhabditis elegans
Exon233847   78   X: 5502001-5502078 Caenorhabditis elegans
Exon233848   129   X: 5502125-5502253 Caenorhabditis elegans
Exon233849   158   X: 5502294-5502451 Caenorhabditis elegans
Exon233850   161   X: 5502496-5502656 Caenorhabditis elegans
Exon233852   161   X: 5503469-5503629 Caenorhabditis elegans
Exon233853   75   X: 5503698-5503772 Caenorhabditis elegans
Exon233854   277   X: 5503823-5504099 Caenorhabditis elegans
Exon233855   115   X: 5504154-5504268 Caenorhabditis elegans
Exon233856   182   X: 5504805-5504986 Caenorhabditis elegans
Exon233857   119   X: 5505130-5505248 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T23F2.2.1 5495985 5505248 -1

1 Sequence

Length
5054

1 Sequence Ontology Term

Identifier Name Description
transcript