WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54G7.2 Sequence Name  C54G7.2
Length (nt)  1443   Chromosome Location  X: 5520184-5520474
Chromosome . Primary Identifier  X Chromosome Location . Start  5520184
Chromosome Location . End  5520474
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04270 MBOA-3 55.3 480 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043190
WBRNAi00012414
WBRNAi00030165
WBRNAi00107616

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54G7.2 5520184 5520474 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016934 mboa-3 C54G7.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54G7.2 5520184 5520474 -1
CDS:C54G7.2 5520742 5521046 -1
CDS:C54G7.2 5521097 5521388 -1
CDS:C54G7.2 5521436 5521685 -1
CDS:C54G7.2 5522385 5522462 -1
CDS:C54G7.2 5522532 5522677 -1
CDS:C54G7.2 5522731 5522811 -1

1 Sequence

Length
1443

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54G7.2.1 C54G7.2.1 1680   X: 5519955-5522819