WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54G7.4 Sequence Name  C54G7.4
Length (nt)  3741   Chromosome Location  X: 5545687-5545836
Chromosome . Primary Identifier  X Chromosome Location . Start  5545687
Chromosome Location . End  5545836
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49989 IFTA-1 141.5 1246 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043192
WBRNAi00012416

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54G7.4 5545687 5545836 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016935 ifta-1 C54G7.4 Caenorhabditis elegans

27 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54G7.4 5545687 5545836 -1
CDS:C54G7.4 5545885 5545984 -1
CDS:C54G7.4 5546027 5546156 -1
CDS:C54G7.4 5546200 5546286 -1
CDS:C54G7.4 5546760 5546895 -1
CDS:C54G7.4 5546944 5547063 -1
CDS:C54G7.4 5547114 5547196 -1
CDS:C54G7.4 5547251 5547449 -1
CDS:C54G7.4 5547498 5547630 -1
CDS:C54G7.4 5547760 5547897 -1
CDS:C54G7.4 5548262 5548752 -1
CDS:C54G7.4 5548806 5548906 -1
CDS:C54G7.4 5548990 5549128 -1
CDS:C54G7.4 5549605 5549661 -1
CDS:C54G7.4 5549713 5549768 -1
CDS:C54G7.4 5549816 5550005 -1
CDS:C54G7.4 5550131 5550235 -1
CDS:C54G7.4 5550282 5550365 -1
CDS:C54G7.4 5550409 5550534 -1
CDS:C54G7.4 5550584 5550729 -1
CDS:C54G7.4 5551155 5551445 -1
CDS:C54G7.4 5551492 5551549 -1
CDS:C54G7.4 5551605 5551685 -1
CDS:C54G7.4 5551730 5551877 -1
CDS:C54G7.4 5552205 5552328 -1
CDS:C54G7.4 5552377 5552566 -1
CDS:C54G7.4 5552619 5552696 -1

1 Sequence

Length
3741

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54G7.4.1 C54G7.4.1 3897   X: 5545587-5552752