WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4h.1 Sequence Name  F14D12.4h.1
Length (nt)  1269   Chromosome Location  X: 5573152-5590493
Chromosome . Primary Identifier  X Chromosome Location . Start  5573152
Chromosome Location . End  5590493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4h F14D12.4h 1269   X: 5573152-5573296

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4h.1 5573152 5590493 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234193   145   X: 5573152-5573296 Caenorhabditis elegans
Exon234219   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234236   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234253   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234270   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234287   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234304   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234321   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234340   148   X: 5586251-5586398 Caenorhabditis elegans
Exon234353   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234367   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234383   17   X: 5590477-5590493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4h.1 5573152 5590493 1

1 Sequence

Length
1269

1 Sequence Ontology Term

Identifier Name Description
transcript