WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4m.1 Sequence Name  F14D12.4m.1
Length (nt)  3946   Chromosome Location  X: 5573152-5590817
Chromosome . Primary Identifier  X Chromosome Location . Start  5573152
Chromosome Location . End  5590817 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4m F14D12.4m 1323   X: 5573152-5573296

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4m.1 5573152 5590817 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234194   145   X: 5573152-5573296 Caenorhabditis elegans
Exon234224   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234241   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234258   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234275   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234292   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234309   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234326   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234344   161   X: 5586251-5586411 Caenorhabditis elegans
Exon234356   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234370   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234382   2340   X: 5587988-5590327 Caenorhabditis elegans
Exon234387   341   X: 5590477-5590817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4m.1 5573152 5590817 1

1 Sequence

Length
3946

1 Sequence Ontology Term

Identifier Name Description
transcript