WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4a.1 Sequence Name  F14D12.4a.1
Length (nt)  1826   Chromosome Location  X: 5575926-5590830
Chromosome . Primary Identifier  X Chromosome Location . Start  5575926
Chromosome Location . End  5590830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4a F14D12.4a 1446   X: 5575969-5576190

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4a.1 5575926 5590830 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234195   265   X: 5575926-5576190 Caenorhabditis elegans
Exon234199   100   X: 5576247-5576346 Caenorhabditis elegans
Exon234212   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234229   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234246   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234263   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234280   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234297   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234314   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234335   148   X: 5586251-5586398 Caenorhabditis elegans
Exon234348   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234362   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234389   354   X: 5590477-5590830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4a.1 5575926 5590830 1

1 Sequence

Length
1826

1 Sequence Ontology Term

Identifier Name Description
transcript