WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4o.1 Sequence Name  F14D12.4o.1
Length (nt)  1299   Chromosome Location  X: 5579594-5588045
Chromosome . Primary Identifier  X Chromosome Location . Start  5579594
Chromosome Location . End  5588045 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4o F14D12.4o 1299   X: 5579594-5579714

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4o.1 5579594 5588045 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234225   121   X: 5579594-5579714 Caenorhabditis elegans
Exon234246   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234263   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234280   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234297   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234314   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234331   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234348   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234366   161   X: 5586251-5586411 Caenorhabditis elegans
Exon234378   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234392   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234396   58   X: 5587988-5588045 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4o.1 5579594 5588045 1

1 Sequence

Length
1299

1 Sequence Ontology Term

Identifier Name Description
transcript