WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4i.1 Sequence Name  F14D12.4i.1
Length (nt)  1245   Chromosome Location  X: 5579594-5590493
Chromosome . Primary Identifier  X Chromosome Location . Start  5579594
Chromosome Location . End  5590493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4i F14D12.4i 1245   X: 5579594-5579714

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4i.1 5579594 5590493 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234227   121   X: 5579594-5579714 Caenorhabditis elegans
Exon234240   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234257   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234274   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234291   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234308   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234325   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234342   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234361   148   X: 5586251-5586398 Caenorhabditis elegans
Exon234374   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234388   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234404   17   X: 5590477-5590493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4i.1 5579594 5590493 1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
transcript