WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4c.1 Sequence Name  F14D12.4c.1
Length (nt)  1742   Chromosome Location  X: 5582410-5585182
Chromosome . Primary Identifier  X Chromosome Location . Start  5582410
Chromosome Location . End  5585182 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4c F14D12.4c 954   X: 5582674-5582770

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4c.1 5582410 5585182 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234208   361   X: 5582410-5582770 Caenorhabditis elegans
Exon234214   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234231   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234248   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234265   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234282   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234299   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234316   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234333   582   X: 5584601-5585182 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4c.1 5582410 5585182 1

1 Sequence

Length
1742

1 Sequence Ontology Term

Identifier Name Description
transcript