WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4g.1 Sequence Name  F14D12.4g.1
Length (nt)  3495   Chromosome Location  X: 5582674-5590278
Chromosome . Primary Identifier  X Chromosome Location . Start  5582674
Chromosome Location . End  5590278 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4g F14D12.4g 3495   X: 5582674-5582770

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4g.1 5582674 5590278 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234230   97   X: 5582674-5582770 Caenorhabditis elegans
Exon234238   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234255   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234272   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234289   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234306   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234323   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234340   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234359   148   X: 5586251-5586398 Caenorhabditis elegans
Exon234372   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234386   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234400   2291   X: 5587988-5590278 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4g.1 5582674 5590278 1

1 Sequence

Length
3495

1 Sequence Ontology Term

Identifier Name Description
transcript