WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B7.5.1 Sequence Name  T22B7.5.1
Length (nt)  1268   Chromosome Location  X: 5642856-5647984
Chromosome . Primary Identifier  X Chromosome Location . Start  5642856
Chromosome Location . End  5647984 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B7.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005718 srv-7 T22B7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B7.5 T22B7.5 1050   X: 5642917-5643049

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.5.1 5642856 5647984 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234474   194   X: 5642856-5643049 Caenorhabditis elegans
Exon234476   110   X: 5643098-5643207 Caenorhabditis elegans
Exon234478   162   X: 5643261-5643422 Caenorhabditis elegans
Exon234480   139   X: 5643471-5643609 Caenorhabditis elegans
Exon234482   113   X: 5644217-5644329 Caenorhabditis elegans
Exon234484   154   X: 5644387-5644540 Caenorhabditis elegans
Exon234486   91   X: 5644652-5644742 Caenorhabditis elegans
Exon234488   155   X: 5644793-5644947 Caenorhabditis elegans
Exon234492   150   X: 5647835-5647984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.5.1 5642856 5647984 -1

1 Sequence

Length
1268

1 Sequence Ontology Term

Identifier Name Description
transcript