WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B7.1a.1 Sequence Name  T22B7.1a.1
Length (nt)  2169   Chromosome Location  X: 5663837-5674067
Chromosome . Primary Identifier  X Chromosome Location . Start  5663837
Chromosome Location . End  5674067 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B7.1a T22B7.1a 1413   X: 5668321-5668464

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.1a.1 5663837 5674067 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234511   74   X: 5663837-5663910 Caenorhabditis elegans
Exon234516   145   X: 5668320-5668464 Caenorhabditis elegans
Exon234522   83   X: 5669687-5669769 Caenorhabditis elegans
Exon234536   93   X: 5671373-5671465 Caenorhabditis elegans
Exon234546   67   X: 5671534-5671600 Caenorhabditis elegans
Exon234558   84   X: 5671657-5671740 Caenorhabditis elegans
Exon234570   130   X: 5672228-5672357 Caenorhabditis elegans
Exon234581   270   X: 5672409-5672678 Caenorhabditis elegans
Exon234594   219   X: 5672728-5672946 Caenorhabditis elegans
Exon234607   230   X: 5673019-5673248 Caenorhabditis elegans
Exon234631   774   X: 5673294-5674067 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.1a.1 5663837 5674067 1

1 Sequence

Length
2169

1 Sequence Ontology Term

Identifier Name Description
transcript