WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B7.1e.1 Sequence Name  T22B7.1e.1
Length (nt)  1317   Chromosome Location  X: 5669932-5673386
Chromosome . Primary Identifier  X Chromosome Location . Start  5669932
Chromosome Location . End  5673386 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B7.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B7.1e T22B7.1e 1317   X: 5669932-5670062

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.1e.1 5669932 5673386 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234529   131   X: 5669932-5670062 Caenorhabditis elegans
Exon234543   93   X: 5671373-5671465 Caenorhabditis elegans
Exon234555   67   X: 5671534-5671600 Caenorhabditis elegans
Exon234565   84   X: 5671657-5671740 Caenorhabditis elegans
Exon234577   130   X: 5672228-5672357 Caenorhabditis elegans
Exon234590   270   X: 5672409-5672678 Caenorhabditis elegans
Exon234603   219   X: 5672728-5672946 Caenorhabditis elegans
Exon234616   230   X: 5673019-5673248 Caenorhabditis elegans
Exon234621   93   X: 5673294-5673386 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.1e.1 5669932 5673386 1

1 Sequence

Length
1317

1 Sequence Ontology Term

Identifier Name Description
transcript