WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B7.1d.2 Sequence Name  T22B7.1d.2
Length (nt)  2351   Chromosome Location  X: 5671365-5674056
Chromosome . Primary Identifier  X Chromosome Location . Start  5671365
Chromosome Location . End  5674056 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B7.1d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B7.1d T22B7.1d 960   X: 5672210-5672357

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.1d.2 5671365 5674056 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234534   101   X: 5671365-5671465 Caenorhabditis elegans
Exon234554   67   X: 5671534-5671600 Caenorhabditis elegans
Exon234569   701   X: 5671657-5672357 Caenorhabditis elegans
Exon234589   270   X: 5672409-5672678 Caenorhabditis elegans
Exon234602   219   X: 5672728-5672946 Caenorhabditis elegans
Exon234615   230   X: 5673019-5673248 Caenorhabditis elegans
Exon234630   763   X: 5673294-5674056 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B7.1d.2 5671365 5674056 1

1 Sequence

Length
2351

1 Sequence Ontology Term

Identifier Name Description
transcript