WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C8.1.1 Sequence Name  W01C8.1.1
Length (nt)  436   Chromosome Location  X: 5692399-5694426
Chromosome . Primary Identifier  X Chromosome Location . Start  5692399
Chromosome Location . End  5694426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020918 W01C8.1 W01C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C8.1 W01C8.1 417   X: 5692399-5692446

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.1.1 5692399 5694426 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234673   48   X: 5692399-5692446 Caenorhabditis elegans
Exon234674   42   X: 5693355-5693396 Caenorhabditis elegans
Exon234675   51   X: 5693439-5693489 Caenorhabditis elegans
Exon234676   141   X: 5693536-5693676 Caenorhabditis elegans
Exon234677   76   X: 5693724-5693799 Caenorhabditis elegans
Exon234678   78   X: 5694349-5694426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C8.1.1 5692399 5694426 1

1 Sequence

Length
436

1 Sequence Ontology Term

Identifier Name Description
transcript