WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03E2.1.1 Sequence Name  E03E2.1.1
Length (nt)  1698   Chromosome Location  X: 5714522-5717562
Chromosome . Primary Identifier  X Chromosome Location . Start  5714522
Chromosome Location . End  5717562 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03E2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017108 cyp-43A1 E03E2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03E2.1 E03E2.1 1581   X: 5714584-5714636

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03E2.1.1 5714522 5717562 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234729   115   X: 5714522-5714636 Caenorhabditis elegans
Exon234730   247   X: 5714684-5714930 Caenorhabditis elegans
Exon234731   126   X: 5715347-5715472 Caenorhabditis elegans
Exon234732   95   X: 5715517-5715611 Caenorhabditis elegans
Exon234733   152   X: 5715660-5715811 Caenorhabditis elegans
Exon234734   284   X: 5715861-5716144 Caenorhabditis elegans
Exon234735   230   X: 5716793-5717022 Caenorhabditis elegans
Exon234736   144   X: 5717069-5717212 Caenorhabditis elegans
Exon234737   305   X: 5717258-5717562 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03E2.1.1 5714522 5717562 1

1 Sequence

Length
1698

1 Sequence Ontology Term

Identifier Name Description
transcript